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Tools for curating biomedical training data for large-scale language modeling

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### Checkbox - [x] Confirm that this PR is linked to the dataset issue. - [x] Create the dataloader script `biodatasets/my_dataset/my_dataset.py` (please use only lowercase and underscore for dataset naming)....

Creates a skeletal structure for fine-grained tagging using the `dataloader` config. I'm modeling this after @sg-wbi's licenses file. Fine-grain tagging requires some discussion before we decide on the explicit class...

Please name your PR after the issue it closes. You can use the following line: "Closes #ISSUE-NUMBER" where you replace the ISSUE-NUMBER with the one corresponding to your dataset. Fixes...

Fixes #59 - Add CEI dataset Please name your PR after the issue it closes. You can use the following line: "Closes #ISSUE-NUMBER" where you replace the ISSUE-NUMBER with the...

Please name your PR after the issue it closes. You can use the following line: "Closes #ISSUE-NUMBER" where you replace the ISSUE-NUMBER with the one corresponding to your dataset. Fixes...

This PR implements a dataloader for BioASQ Task A (text task) in an attempt to close issue #261 . I've attempted to stay close to `examples/bioasq_task_b.py` whereever possible. Please let...

Fixes #67 - Add Monero If the following information is NOT present in the issue, please populate: - **Name:** *MoNERo* - **Description:** *MoNERo: a Biomedical Gold Standard Corpus for the...

Fixes #119 If the following information is NOT present in the issue, please populate: - **Name:** *LocText* - **Description:** *https://pubannotation.org/projects/LocText* - **Paper:** *https://doi.org/10.1186/s12859-018-2021-9* - **Data:** *https://pubannotation.org/projects/LocText* ### Checkbox - [x]...

Closes #236 ### Checkbox - [x] Confirm that this PR is linked to the dataset issue. - [x] Create the dataloader script `biodatasets/my_dataset/my_dataset.py` (please use only lowercase and underscore for...

Closes #230 ### Checkbox - [x] Confirm that this PR is linked to the dataset issue. - [x] Create the dataloader script `biodatasets/my_dataset/my_dataset.py` (please use only lowercase and underscore for...