bigdoyle

icon location Microbiome|Metagenomics|Microbial genomics know some bash. muddle my way through the rest

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cann't get the result of snps.filt.vcf and snps.vcf

Also observe this with conda install of 4.6.0 in unix. Command: snippy --cpus 16 --prefix ${b}_snps --outdir ${out}/${b}_snpy --ref ${ref} --R1 ${R1} --R2 ${R2} --fbopt '--report-monomorphic'