forceatlas2

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Fixed setup file

1

The repo was not exposing the cython files correctly. The headers (pxd) exposing the functions were not installed in site-packages. This fixes that issue and runs now on python 3.10.

cvanelteren

AttributeError: module 'fa2.fa2util' has no attribute 'Node'

3

Hello, I am getting an error below when computing positions on an rdflib graph Any ideas? ``` File "c:\home\projects\SE\ConfigurationKG\se-configuration-kg\code\configuration2graph.py", line 217, in graph_data=compute_layout(G) File "c:\home\projects\SE\ConfigurationKG\se-configuration-kg\code\configuration2graph.py", line 173, in compute_layout pos...

dmitra79

Problem installing fa2 on Python3.9

26

It seems that fa2 is not compatible with Python3.9 `ERROR: Command errored out with exit status 1: command: /usr/local/opt/[email protected]/bin/python3.9 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/tb/yb5np6tx5tg852_7ktrz3qy40000gn/T/pip-install-345a9yt5/fa2_127e2c475c0344ff93462856df90b805/setup.py'"'"';...

satrio-yudhoatmojo

Release a new version

1

Hi, I'm currently trying to use `forceatlas2` from [conda-forge](https://github.com/conda-forge/fa2-feedstock) with `python3.9` but the build is failing because it's using the version `0.3.5` ([recipe](https://github.com/conda-forge/fa2-feedstock/blob/18828078849b68e88a3ad314ecb8937447da689c/recipe/meta.yaml#L2) and [logs](https://dev.azure.com/conda-forge/feedstock-builds/_build/results?buildId=365624&view=logs&jobId=9a864fd9-6c8f-52ca-79ce-2aa6dca1a1de&j=9a864fd9-6c8f-52ca-79ce-2aa6dca1a1de&t=10fc5aa2-324e-5982-4c88-6b31fcab16b3)). The build from `master` is...

jjacobelli

tqdm notebook

1

Updated with the possibility to use notebook version of tqdm

gaardhus

linLogMode: implement log attraction

1

Hi @bhargavchippada and thanks for maintaining this package. Since I needed to use the linLog mode, I implemented the `logAttraction` and made the `linLogMode` argument work. I followed the implementation...

victorbenichoux

Added first implementation of adjustSizes. Compiles but needs testing

7

Since I found this package useful for my work but I needed my nodes not to overlap, I decided to work on the porting of the "Prevent overlap" feature in...

matteoacrossi

Dear developers, Thanks for the very useful implementation! I plan to use your tool for single-cell analysis. In this context, I have different representations of the data. For example, the...

MohamedRefaat92

Maintain position history

4

This pull request adds the ability to maintain the position history while the ForceAtlas2 algorithm progresses (just within the NetworkX function, for now). This is useful if you want to...

beyondbeneath

Is there any way to use an initial seed?

3

I've noticed that, in general, multiple running of the algorithm can lead to different layouts (positions). I was wondering whether there's a way to set an initial seed and force...

filannim