Griff

Possibility to download all GEO data locally.

1

Great library! Just wondering if it is possible to allow bulk downloading of the GEO dataset from the outset rather than when it is queried. I want to speed up...

docker-compose up failing at end on mac? permissions with cab_rqworker_1?

4

I'm not sure if I've done anything wrong at my end, but when I simply clone repo and follow instructions running docker-compose up, the build fails right at the end?...

README inference example fail on M1 macbook after fresh install

2

**Describe the bug** Crashing on M1 Mac, upon following README and sample image provided as per example. **To reproduce** Create conda environment, `pip install stardist` then run the first few...

Great package, ty. I was wondering if rather than making API requests for a list of pmids, is there dump of the citation network somewhere for pubmed? I would just...

database backend to unlock persistent metadata and downstream analysis

3

Hi, nice work! I was curious though, was there any thoughts as to using a database backend e.g. SQL, postgres, mongoDB to hold the plate info and results. You could...

Understanding doepipeline on simple example

2

Great package. I've just begun tinkering at a very low level to make sure my intuition reflects what the code is doing. I've set a two factor experiment with a...

When I compile the code with a grid size of 1024 I get the following compile error: ``` shell mpif90 -c -fopenmp -DMY_OPENMP -DMPI mat_ini_cubep3m.F90 mat_ini_cubep3m.F90:548.55: call MPI_BCAST(temperature_grid,mesh(1)*mesh(2)*mesh(3)*3,MPI_REAL,0,... ``` As...

Is there a way to reset the password? On Unraid, I noticed the smtp doesn't ask for a password so I'm wondering how that email works. I've got a mailgun...