poly
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bebop
A Go package for engineering organisms.
## Describe the desired feature/enhancement I'd like to have a formal group for non-programming or light programming biologists to contribute to Poly. ### Is your feature request related to a...
## Describe the desired feature/enhancement For a while we've had this really great parser for NEB's enzyme cut site database rebase. ### Is your feature request related to a problem?...
## Describe the bug The genbank parser cannot handle repeating attribute keys like with `/db_xref` below:  ### Severity of the bug This...
https://github.com/TimothyStiles/poly/blob/f76bf05497cb89d5a48ab0a2ac41db9cfc425d12/primers/pcr/pcr.go#L170 Circular is used for all sequences. Should be on a per sequence basis.
`Gff.AddFeature()` seems to intend to create a copy of the `Feature` it is provided. Dereferencing the pointer is not sufficient to do this, as `Feature` structs contain mutable fields (e.g....
While reviewing @cachemoi 's #350 , I noticed they added an explicit check for the type of a genbank `Feature` when determining whether the given feature was a coding sequence...
## Describe the desired feature/enhancement Seems like `golangci` dropped support for `golint` a few versions ago. IMO, we should definitely have some sort of linting enabled! ### Is your feature...
If there is a newline at the end of a slow5 file, the parser detects this as an additional line / read.
the `
## Changes in this PR Rewrite of the Genbank parser. Currently in a draft state. ### Why are you making these changes? See #434 . ### Are any changes breaking?...