Beant Kapoor

icon location Knoxville, TN icon location I am a Graduate Research Assistant in the Department of Entomology and Plant Pathology in the University of Tennessee, Knoxville.

Results 4 issues of Beant Kapoor

PacBio long reads?

2 comment

Hello, thank you for creating this great software. I look forward to using this software in my analyses. However, I have a question, does Dysgu supports PacBio long reads? I...

enhancement

Not able to merge insertions

5 comment

Hello Fritz, We have a tree genome pedigree in which we are comparing 5 different genomes to the reference genome. We aligned each genome using mummer4 and called structural variants....

Combining bacterial and fungal classification reports

Hello, I was finally able to run kraken2 with GTDB and NCBI fungal genome database however I ran this process separately due to RAM issues. Now, the issue is I...

classify: unable to allocate hash table memory

7 comment

I have GTBD files compatible with `k2` command however when I try to run the `k2 classify` command it gives the following error- ``` Loading database information...Failed attempt to allocate...