Change support for MAVIS input in summary module

[zhemingfan]

Addresses issues in https://github.com/bcgsc/mavis/issues/307

[codecov[bot]]

Codecov Report

Base: 86.81% // Head: 86.92% // Increases project coverage by +0.10% :tada:

Coverage data is based on head (bfdf8b7) compared to base (ec82b70). Patch coverage: 95.94% of modified lines in pull request are covered.

Additional details and impacted files

@@              Coverage Diff               @@
##           develop_v3     #336      +/-   ##
==============================================
+ Coverage       86.81%   86.92%   +0.10%     
==============================================
  Files              57       57              
  Lines            9327     9390      +63     
  Branches         2335     2355      +20     
==============================================
+ Hits             8097     8162      +65     
+ Misses            755      752       -3     
- Partials          475      476       +1     

Flag	Coverage Δ
unittests	86.92% <95.94%> (+0.10%)	:arrow_up:

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files	Coverage Δ
src/mavis/summary/main.py	77.30% <ø> (ø)
src/mavis/summary/summary.py	70.00% <93.18%> (+5.41%)	:arrow_up:
src/mavis/annotate/file_io.py	77.06% <100.00%> (+0.65%)	:arrow_up:
src/mavis/constants.py	96.72% <100.00%> (+0.02%)	:arrow_up:
src/mavis/pairing/pairing.py	89.86% <100.00%> (+0.13%)	:arrow_up:
src/mavis/util.py	80.07% <0.00%> (+1.42%)	:arrow_up:
src/mavis/cluster/cluster.py	92.10% <0.00%> (+2.63%)	:arrow_up:

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[zhemingfan]

The version of tabulate has been frozen to version 0.8.9 according to the fix suggested in the Snakemake repository.

[creisle]

Can you also add a description of the new column here? docs/outputs/columns.md

[zhemingfan]

Can you also add a description of the new column here? docs/outputs/columns.md

Added column information in the columns 960bd67.