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Published 20 hours ago • verified publisher icon bcgsc

Integrate CHM13-T2T support

Open zhemingfan opened this issue 2 years ago • 0 comments

Hg38 will remain the workhorse genome for annotation work, but in case users are interested in working with CHM13-T2T in the future - there should be a feature that converts the breakpoints found within a MAVIS file formats to a BEDPE file, then liftOver those coordinates back to the hg38 genome, before associating those coordinates with the original MAVIS calls.

  • [ ] Add CHM13-T2T cytoband file cytoband file to optional download support

zhemingfan avatar Apr 12 '22 20:04 zhemingfan