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Published 20 hours ago • verified publisher icon bcgsc

How to restart a failed run

Open jesgomez opened this issue 2 years ago • 1 comments

Please report

  • [v1.4.3 ] version of RNA-Bloom with java -jar RNA-Bloom.jar -version
  • [ 11.0.9.1] version of java with java -version
  • [ ] exact command used to run RNA-Bloom

Hi, I was running RNAbloom with long and short reads and it failed during the getting transcripts step. I'd like to know how can I restart the run from the latest checkpoint.

Thank you.

Jèssica

jesgomez avatar Feb 28 '22 10:02 jesgomez

Hi Jessica,

You can simply re-run the exact same command and it should restart at stage 3.

Ka Ming

kmnip avatar Feb 28 '22 20:02 kmnip