Bart Charbon
Bart Charbon
End-to-end tests are not executed by Travis CI, please execute manually: - [ ] `APPTAINER_BIND=$PWD bash test/test.sh` passes - [ ] Updated documentation
ncER scores should be unique, however due to the resource being liftovered from GRCh37, the bins are overlapping in some places. This leads to errors in annotation. Possible solution: retrieve...
End-to-end tests are not executed by Travis CI, please execute manually: - [ ] `APPTAINER_BIND=$PWD bash test/test.sh` passes - [ ] Updated documentation
When starting VIP with for example Annovar annotations in the input VCF some of the headers seem to go missing after the filter samples step.
If a sample sheet e.g. contains a "test.cram" on line 1 and a "test.bam" VIP errors because this leads to a naming collision "test[something]" somewhere down the line.