balston

The doMPI test job has worked. I'm now trying a snow test job again over 2 nodes.

The snow test job has failed: ``` GERun: mpirun RMPISNOW Loading required package: utils -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the...

I've downloaded copies of the Linux CRYSTAL23 archives including a copy of the UK Academic License agreement to my iMac and then uploaded them to my Scratch on Myriad.

Looking at the binary archives for CRYSTAL23 I think we need OpenMPI 4.1.1 compiled with Intel 2022 compilers which we don't currently have.

Might as well use the latest version - AFNI_23.0.02

Downloaded the source code which has no obvious version number so checking to make sure it is 23.0.02 😢

I had to do a test build from the downloaded source to get at the version number. Confirmed that it is 23.0.02: ``` afni version : Precompiled binary linux_openmp_64: Jan...

Downloaded source archive is now in: ``` /shared/ucl/apps/pkg-store/afni-23.0.02.tgz ``` on both Myriad and Kathleen.

I've now got an updated build script ready to go. Will pull down to Myriad and run on Monday.

Build script run as follows on Myriad: ``` cd /shared./ucl/apps/build_scripts ./afni-23.0.02_install 2>&1 | tee ~/Software/AFNI/afni-23.0.02_install.log-30012023 ``` has completed without errors.