balston

Results 500 comments of balston

Use the following module commands to access it: ``` module load python3/recommended module load hisat2/2.2.1/gnu-4.9.2 ```

This cannot really wait for the Spack R build process so firstly updating the base R plus recommended packages build script.

Running from _build_scripts_: ``` module -f unload compilers mpi gcc-libs ./R-4.2.3_install 2>&1 | tee ~/Software/R/R-4.2.3_install.log-17042023 ```

Build finished without errors. It also runs checks and the R regression tests and they have worked without errors as well. Will update the R base module file and then...

Running from _build_scripts_: ``` ./R-4.2.3_packages_install 2>&1 | tee ~/Software/R/R-4.2.3_packages_install.log-17042023 ```

The additional packages build finished about 11pm last night. Today I will check the output for errors. We add about 675 additional packages (including automatic dependencies) which is why it...

There is at least one real error: Package: rgl: ``` ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices...

The error building the rgl packages was caused by the runtime test failing due to an issue with the XQuartz X server running on my MacBook - even running the...

The RcppParallel package appears to have been installed correctly.