ukbb_cardiac

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About the dataset

12

您好，我在下载了uk的2964返回数据集后，找到了标注数据，但是里面并没有CVI42的xml文件，请问这个解析标注数据的xml文件是您这边制作的，还是从uk下载的呢

zyqdsn

VTK reading errors

3

Receiving the following error when running: ```ERROR: In /usr/src/VTK-8.2.0/IO/Legacy/vtkDataReader.cxx, line 3181 vtkPolyDataReader (0x55a6391564c0): Error reading ascii cell data! for file: /data/mri/ukb-cardiac-mri/1000948/cine_motion/myo_contour_ED_z02.vtk ``` Resulting in: ``` Traceback (most recent call last):...

jrhomburger

Loading The graph model

2

Hi, whenever I try to load the model I get the following error. can you please help me resolve this matter plese? thank you. ValueError: Node 'gradients/UNet/conv0_up/batch_normalization_3/FusedBatchNorm_grad/FusedBatchNormGrad' has an _output_shapes...

ghost

No such file: sa_crop.nii.gz、 seg_sa_crop.nii.gz

3

Hi, I ran into some problems when running eval_strain_sax.py. It shows that FileNotFoundError: No such file or no access: '/cine_motion/sa_crop.nii.gz' I think maybe the following statement did not execute successfully:...

Tiantian089

average_3d_ffd segmentation fault error

11

Hi, I tried running the code both on MacOS and Ubuntu, using the official MIRTK docker image as base image. In both cases I get a seg fault error during...

vt232

Demo fails to calculate wall thickness (ValueError: not enough values to unpack)

4

Hi, Running the demo pipeline, all of the results CSV files are generated except for the wall thickness. The error I get is: ` 1 Traceback (most recent call last):...

yaacoo

Hi,im very interested in your project,and also made several group of segmented result,and im already registed in the biobank ,the condition are still under review,but im really want the ground...

Mr-egg

Hi, im very interested in your project,and there also some question im gonna ask, first, i run the demo_pipeline.py, and there are no error or warning, and im wondering where...

Mr-egg

 Dr. baiwenjia. I have encountered the following problems in processing ukbb: 1. each dicom picture is divided into corresponding folders, but no corresponding nii.gz file is generated, I want...

Janner125

average_3d_ffd error

2

Hi, thanks for your contributes. I was trying to run _eval_strain_sax.py_. But there seems to be a problem: **"IOError: Cifstream::Open: Failed to open file /public/home/heart_mri_nii/1000012/cine_motion/ffd_z07_00_to_01.dof.gz Error: transform-points command returned non-zero...

Alaylm1016