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LM-GVP: A Generalizable Deep Learning Framework for Protein Property Prediction from Sequence and Structure

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Bump transformers from 4.2.2 to 4.36.0

Bumps [transformers](https://github.com/huggingface/transformers) from 4.2.2 to 4.36.0. Release notes Sourced from transformers's releases. v4.36: Mixtral, Llava/BakLlava, SeamlessM4T v2, AMD ROCm, F.sdpa wide-spread support New model additions Mixtral Mixtral is the new...

dependabot[bot] avatar dependabot[bot]

dependencies

aws s3: fatal error: Unable to locate credentials

Sorry to bother, could you please tell me how to obtain the checkpoints?

tyang816 avatar tyang816

More details about data preprocessing

Hi, I am so much interested in this work, however, I found no preprocessing logic from raw TAPE dataset to the input csv file which contains columns called "primary" "structure_path"...

tjoyliuTianqiao avatar tjoyliuTianqiao

Could you upload the script that downloads the pdb file for the GO dataset and generat the pdb file by Rosetta

heavenAsk avatar heavenAsk

could generate_gvp_dataset.py be uploaded to make follow this work easier?

jiyanbio avatar jiyanbio

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LM-GVP: A Generalizable Deep Learning Framework for Protein Property Prediction from Sequence and Structure

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