Aurélien Naldi

I started to build a proof of concept for a "borrowed iterator" using ouroboros. I have some working code for a specific iterable struct and I'm trying to generalize it...

Thanks for the feedback! I already had a look at #1089 and my [current version](https://gist.github.com/aurelien-naldi/39343e59b7b653199be506d0eb580732) is fairly close to the refmap proposed there, but uses Options instead of ManuallyDrop to...

I have a few open questions # Garbage collection The borrowed object relies on a copy of an existing Python object, I'm a bit naive about how PyO3 handles this,...

The immutable objects with separate locks for individual fields sounds great, but I'm not convinced that it helps much with the iterator use case (which is a separate object accessing...

Here is a first draft: https://gist.github.com/aurelien-naldi/905162889f2a3d90c09fc72f5b74cb82 It has a lot of boilerplate as it duplicates the core PyO3 structs (PyCell and associated references) but is self-contained. Depending on your feedback,...

@davidhewitt: did you have time to play with it?

Thanks for your feedback! I agree on the settings part but I first wanted to know if it had a chance of getting in. I also want to add a...

Bioconda already has a package for cellnoptr: https://anaconda.org/bioconda/bioconductor-cellnoptr The CellNopt team also has a python wrapper (using RPy2), for which we probably need a new package. Including CellNopt (and boolnet)...

I received an update from Enio Gjerga about a new release and the list of their tools. These ones are already in the bioconductor channel: * CellNOptR: bioconductor-cellnoptr 1.32.0 *...

Agreed, but I think we need to prepare a better system to host them first. Using gist and common notebook viewers is fine, but I would rather keep them together...