Ashish Jain

Do I need google API key even for plotting OpenStreetMap/Stamen Maps?

2

After reading the manual I thought that for plotting OpenStreetMap/Stamen Maps I don't need google API. Is that true or is all the functionality of ggmap is dependent on google...

UnicodeDecodeError When running hicConvertFormat to convert HiC to Cool format

15

**Welcome to the HiCExplorer GitHub repository! Before opening the issue please check that the following requirements are met :** - [ ] Search whether this issue (or a similar issue)...

I am generating the hic option using the juicertools version juicer_tools_1.22.01.jar. I am specifying the different normalizations in the option -k SCALE,KR but not able to see them in the...

Error in netVisual_heatmap() when using different cell types for sender and receiver

1

Hi, I am getting the following error when I use different cell types for sender and receiver to show on the heatmap using `col.use` and `row.use` arguments. draw(netVisual_heatmap(cellchat, color.heatmap =...

Hi, I am trying to run the example code of submitGreatJob function but it is failing with "Error: Not found". Can you please look into this? > session_info() ─ Session...

Hi, Thank you guys for creating a really nice package to visualize single cell data. Can you please tell us what is the scalability limit of the portal like in...

No MCC values in the filter_param plot

9

Hi, I am trying using the filter_params function to select the optimum A.min values for filtering. We are interested in contacts on chromomse 4. When I check the plot, it...