Anna Arutyunyan

icon indicating an email [email protected]

icon company Wellcome Sanger Institute icon location Cambridge, UK icon location PhD student at Wellcome Sanger Institute, VenTo Lab

Results 2 issues of Anna Arutyunyan

Ratio of cells from different individuals

24 comment

Hi, May I ask how does souporcell handle situations with extremely uneven (smth like 95% of cells from individual 1 and 5% - from individual 2, or even more skewed)...

TraCeR on 10X cellranegr vdj output filtered_contig.fasta demultiplexed files

8 comment

Hi, Similar to this issue https://github.com/Teichlab/bracer/issues/21#issuecomment-417711510 in BraCeR, can one run TraCeR on the per-cell fasta files demultiplexed from filtered_contig.fasta output of cellranger vdj? If yes, then with what adjustments?...