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coverageBed killed

Open DexinYang1998 opened this issue 4 years ago • 1 comments

When I ran this command, coverageBed -counts -a a.bed -b b.sort.bam > c.tsv, the process broke down. The b.sort.bam was around 2.3G.

coverageBed: line 2: 137437 Killed ${0%/*}/bedtools coverage "$@"

DexinYang1998 avatar Sep 17 '21 18:09 DexinYang1998

Waas the process killed because of too much memory or too long of a run time on a cluster? I am not able to help without more information.

arq5x avatar Sep 19 '21 14:09 arq5x