spateo-release

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TypeError when creating AnnData object from Pandas DataFrame

1

https://github.com/aristoteleo/spateo-release/blob/22220c57f8d501663be23c8f948dd310b505ca3d/spateo/svg/utils.py#L43 **Description:** When trying to create an AnnData object from a Pandas DataFrame using a = AnnData(df2), I encountered a TypeError: `TypeError: Setting a MultiIndex dtype to anything other than...

WeipengMO

import lastest spateo error

2

Dear Spateo developers, I have installed the spateo by "pip install spateo-release-main.zip. However, when I imported spateo, I encountered the following error. I can't find 'fastpd' to install. Do you...

ChangliangWang

Can I use non cellsplited data to use spateo to make 3D?

1

Dear, Thanks for your great working for spateo. I want to ask a question. Can I use the level data(bin15) not use cellsplited to make 3D visualization? At present, my...

uush99

How to transfer xenium dataset to Anndata which could be used for 3D visualization

6

Hi developer. I'm wondering how to transfer the xenium dataset to anndata which could be used for 3D visualization. And also for the example, where we can downalod the "E7-9h_cellbin_h5ad.zip"

Yifan-debug

Fixed this [issue](https://github.com/aristoteleo/spateo-release/issues/232).

Sichao25

Some sample data seems to be missing. I’m not sure if this is due to network issues on my end or if it’s affecting everyone. Default download doesn't work: -...

Sichao25

pip下载安装的时候显示错误

6

Hi, I I tried with pip install and got this error. cl : Command line error D8021 : invalid numeric argument '/Wno-unused-variable' Thank you

Yifan-debug