ardy20
ardy20
Just as a quick update that we tested hifiasm and found that the IPA creates significantly better assemblies with higher N50.
Dear ALLHiC Team For Omni-C, the -e option is still required. What should we put for that?
OK, Thanks.
Could you please provide a detailed manual for the Singularity users? Could Finder be run on a local desktop computer as dockers are not usually supported on HPC cluster? It...
Hello Thanks for your tool. I used yahs on hifiasm rice assembly and see that top 24 scaffolds (in size) are bigger than 10Mb (chromosome level). Does this mean that...
Hi I am trying to create an ancestral file for Simmondsia chinensis but do not know how to choose parents or ancestors for that because it is the only species...
OK, Then which files are these (in -km)? ancestor_left = ancestor_top =
Thanks. Do we have a guide how you have prepared AEK or ACEK? I found one only for AAK here: (https://github.com/SunPengChuan/Angiosperm-karyotype-evolution/blob/master/AAK_construction/commond.md)
Hello Thanks for developing this tool. Could you please guide how to prepare database to find HGT events in insects coming from plants? Regards