aparrot89

In OMOP-CDM model, most of NDC codes are mapped to RxNorm which is the standard classification in this model. In MIMICIII for some drugs NDC code is not used (NULL,...

The work has been done in SQL and with csv files for the mapping. We hope it's easy to read and to improve by the community.

@paulchurch Because the code is not open and reproducible, we didn't put your mapping on github and did an entire new one (only with NDC-RxNorm and manual mapping) But our...

Hi, There are some changes in microbiology for OMOP! https://github.com/OHDSI/CommonDataModel/issues/265

In omop there are 4 tables in relation to drugs : - 2 non derived tables : drug_strenght and drug_exposure https://github.com/OHDSI/CommonDataModel/wiki/DRUG_EXPOSURE https://github.com/OHDSI/CommonDataModel/wiki/DRUG_STRENGTH - 2 derived tables : drug_era, dose_era https://github.com/OHDSI/CommonDataModel/wiki/DOSE_ERA...

I agree with the second remark. Maybe we have to change that. For the first one when for example, the rate of epinephrine is ... ug/kg/min that not real data...

I don't know where to put the weight and if we need to have this information in this relation. Sometimes we may need the body surface area (for chemo for...

Hi, Sorry about the delay. - Only the drug_exposure table is finalized. It contains all the data of the tables prescriptions and inputevents_mv / _cv. We have made the choice...

Hello Alistair, Yes that's a good idea. I'll do that for the next scores I'll calculate Thanks for your feedback

We converted MIMIC in OMOP v5.3. The new OMOP version is OMOP v6.0 but all the OHDSI tools are still not working in OMOP 6.0. So we will wait a...