anuravi1234

Hello, I am trying to run the getmlst.py script. This is the command I am using: python2 /mnt/volume_2/srst2/scripts/srst2.py --input_se 669_EF_MAG_EF_MAG.fastq --output 582_mlst --log --mlst_db /mnt/volume_2/srst2/Enterococcus_faecium.fasta --mlst_definitions /mnt/volume_2/srst2/efaecium.txt --read_type q The...

Hello! I love your tool and works perfectly with TRGT. I am wondering if this also works for Straglr VCF as well? Thanks!