Ania Tassinari

Trying to run `jekyll serve` and getting errors about not being able to activate `crack` because of conflicting versions of dependency, `safe_yaml`. `Jekyll` requires ~>0.7.0 and `crack` ~>0.9.0. Exact error:...

Allow logFC shrinkage in DESeq

4

For gene ranking (for GSEA, for example) and visualizations (on volcano plots, for example), DESeq author Michael Love suggests shrinking of the effect sizes (log-fold changes) with the `lfcShrink` function...

Add argument to force direction of an annotation

3

I'm trying to add a sample annotation to a gene expression heatmap. Since the data is in a tidy format, it is unclear if the annotation column I want to...

Crash on device plug in in Ubuntu Oneiric 11.10 64 bit

2

Code::Blocks built the git project with several warnings. Application starts on Run, says there is no device connected. When plugging in the pen, app crashed immediately and I get "Process...