annrosebright

Hi Thank you very much. I recognized that later, and that part appears to be fixed now. But now I'm having trouble with the motif file. I'm attempting to use...

I thought the problem must be because there are repetitive TFS and tried adding .1 to the motif and TF. I got the following error: Traceback (most recent call last):...

Hi Mette, Yes, our data is 10x and I have analyzed the data using ArchR. I tried to extract cluster cell names and then split the bam file as follows....

Hi Metter, Thank you for your reply. I am not sure if I understand your suggestion. But if you mean Tn5 cut sites generated while running the ATACorrect, they look...