andyzim111

Question about phosphosite localization confidence.

12

Hi, Vadim I recently want to test DIA-NN function of phosphosite localization. I downloaded the raw MS data which included 166 synthetic phosphopeptides spiked in yeast lysate and the spectral...

Does DIA-NN support fractionation DIA data?

6

If I have two samples, each of them was fractionated into 10 fractions, then each of fractions was analyzed by DIA. How can I use DIA-NN to analyze my data?

Feature request.

6

Thank the developer for providing so a fantastic tool for DIA data analysis. I want to request two features of DIA-NN. 1. The number of peptides of identified protein in...

Pfinds errored when searching mgf files.

1

When I searched the mgf files generated by TimsTOF pro operated in PASEFF mode, the latest Pfind 3.1.4 software errored. The screenshot of error is in the attachment.