Andrew Lynch comments

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                                            Andrew Lynch

Gingko Web Platform: Copy number calls stalling with FACS input.

Thanks for the quick reply. Here is the link: http://qb.cshl.edu/ginkgo?q=results/6VZust8tj6mK3la8lzxn

Gingko Web Platform: Copy number calls stalling with FACS input.

Hi Jacob, Thanks for looking into this. I've attached the FACS file. I've also noticed that when I removed the FACS file, the analysis completes. However, the predicted ploidy from...

Gingko Web Platform: Copy number calls stalling with FACS input.

Hi Robert, Thanks for looking into this. Any recommendations for next steps on my end? Also, out of curiosity, what is the utility of having the lower limit of ploidy...

Gingko Web Platform: Copy number calls stalling with FACS input.

I think the option to set a minimal ploidy would be great, or at least, in the case of attaching the FACS estimated ploidy, pulling the lowest estimated value. Andrew

Gingko Web Platform: Copy number calls stalling with FACS input.

Hi Folks, Thanks for working on this. Has this been deployed to the web platform? It looks like the minimum ploidy is still 1.5 and I have been having the...

Gingko Web Platform: Copy number calls stalling with FACS input.

Hi @mschatz and @robertaboukhalil, I hope this is okay. I appreciate you both putting the time in on this. I'm just curious if this has been implemented for the web...