A. Morgat
A. Morgat
Hi Adnan, as I needed to create the Rhea reaction, I submitted CHEBI:193105 common name = "an α-neoclovene" CHEBI:192759 is-a CHEBI:193105
Document use of has_major_microspecies_at_pH_7_3 relationship type and how to traverse is-a in CHEBI
FYI, the predicate has_major_microspecies_at_pH_7_3 is populated in our local version of ChEBI (see ftp://ftp.expasy.org/databases/rhea/rdf/chebi.owl.gz) This chebi.owl file corresponds to data used in Rhea and UniProt. To be consistent ChEBI, Rhea,...
Hi @cmungall! May I ask a naive question? Why don't you use the chebi_pH7_3_mapping.tsv file (https://ftp.expasy.org/databases/rhea/tsv/chebi_pH7_3_mapping.tsv) which does the job and is provided in the Rhea distribution? If you are...
Sorry for my misunderstanding ;-) Yes, there are many missing relationships in ChEBI, at least 1'650 thanks to your analysis :-( So this question is for the ChEBI curators (@amalik01)....
Hi Adnan, as I needed to create the Rhea reaction, I submitted CHEBI:193106 common name = "a bicycloelemene" CHEBI:172935 is-a CHEBI:193106