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                                            amelinba

Use of --vanilla to call R leads to issues in custom R installations

Also encountering the same issue ( cnvkit 0.9.7 installed with Conda on CentOS 7.8 ) : #--------------------------------- RuntimeError: Subprocess command failed: $ Rscript --vanilla /scratch/amelinba/slurm-job.15746118/tmp5t3mgy05 b"Segmenting 1\nSegmenting 10\nSegmenting 11\nSegmenting 12\nSegmenting...

Use of --vanilla to call R leads to issues in custom R installations

You are right, increasing the amount of RAM (from 8GO to 16GO) has solved this issue. Thank you for your suggestion PS: This error appeared only when I use the...