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                                            Alex Linan

Question about 'Dp_main = sum(t_list) / sum(n_list)'

Hi, I too an trying to runt eh D-statistic and have a similar error when running the command python2 popstats.py --tped stacks10_r0.6_7pops.tped --tfam stacks10_r0.6_7pops.tfam --not23 --pops boutoniana,pterocalyx,nodosa,borbonica --informative ERROR **Traceback...

Question about 'Dp_main = sum(t_list) / sum(n_list)'

I have changed the chromosome names to 1 (this is a RADseq dataset). I am not sure how to change the default block size. None of the program options really...

Question about 'Dp_main = sum(t_list) / sum(n_list)'

I think I have corrected the error to ensure the same number of individuals are in both tped and tfam files. However, when I run the program I still get...

Question about 'Dp_main = sum(t_list) / sum(n_list)'

Thanks so much Pontus! So, if I am interpreting this correctly, the positive D-stat indicates admixture between A and X? Also given that I know the phylogeny of these species...