Adam Richard-Bollans

**Is your feature request related to a problem? Please describe.** Annotating relations and labels in text can become cluttered with lots of incorrect and unnecessary labels. **Describe the solution you'd...

Smiles resolution of 5263-34-3

1

with ``cirpy.resolve('5263-34-3', 'smiles')`` the result is '[Cl]|[Hg]|12|[OH+]=C(CC[OH+]|1C)NC3CCCCC23' which I don't think is valid. I believe this is the compound it should resolve to: https://pubchem.ncbi.nlm.nih.gov/substance/273559422 CIRpy version: v1.0.2

I am trying to download information about all compounds that I consider to be active against Plasmodium species (i.e. inhibition IC50 of less than 1μM). I seem to be mostly...

Custom reference taxonomies

3

I would like to use the WCVP and/or IPNI as reference taxonomies and was wondering if there was any way of using custom taxonomies when doing entity linking?

I want to use rebel to extract all relationships tagged with 'medical condition treated'. Following the huggingface tutorial (https://huggingface.co/Babelscape/rebel-large), I have partly achieved this and can then filter the outputs...

I'm interested in the proportion of Level-3 regions that are considered islands. Firstly, I've determined there are 369 level 3 regions in total using: ```python import cartopy.io.shapereader as shpreader tdwg3_shp...