Alexie Papanicolaou
The correct way to implement both blat and blast is to ensure that the 'search database' for the organism is: a) full path to the 2bit file b) blast databases...
Will not work as it can't parse the version. the solution is to use java 8 ``` Grails not found using grailsw Using gradlew FAILURE: Build failed with an exception....
Hello When using `/apollo/auth/login`, login with the admin user works as expected: fails with wrong password and redirects with correct password. The redirection however is to this 404 of `/apollo/grails/signIn`:...
Hello I came across this whilst trying to change the work or temp directories. The change was done correctly on the config and apollo deploy was rerun. This finds no...
It took me a while but I figured a setup for serving a secure webapollo so that it can serve https://DOMAINAME instead of http://DOMAINAME without hicups. DOMAINAME is basically what...
``` krakenuniq-download --db $DBDIR/plants --threads 10 --min-seq-len 10000 --dust refseq/plant && krakenuniq-build --db $DBDIR/plants --threads 10 --kmer-len 31 --taxids-for-genomes --taxids-for-sequences Downloading assembly summary file for plant genomes, and filtering to...
Currently DEGreport depends on lasso2 which is an R4 only package. Can we have a version that is compatible with 3.6 (considering that R4 is quite broken... still...)
**Brief** Does it make sense for `client/src/components/Upload` to have code to prevent a specific file_sources entry from being displayed? Just like writable:true is required for export **Verbose** For example this...
When search a history with `genome_build:Bob1` it will find `Bob1` and `Bob1.1` How can we limit it to just Bob1, would it make sense to allow for - $ \b...
Hello Having just updated to the both Ubuntu 20.04 I did a fresh install of Galaxy, (upgrading from 16.something). Using Python 3.6.11 I'm breaking my head around this for a...