Alexie Papanicolaou

Results 21 comments of Alexie Papanicolaou

not sure how without canvas...! or even if it is that useful. maybe dump the entire track (not just the part within view ) as an svg?

Encountered same issue with salmon tag 1.5.2 and Ubuntu 20.04. Uninstalling a system package doesn't sound the right solution....

Solved with `-DFETCH_STADEN=TRUE` to recap, installing on an Ubuntu 20.04: ``` git clone --depth=1 https://github.com/COMBINE-lab/salmon.git cd salmon git checkout tags/v1.5.2 apt-get build-dep -y salmon cmake -DFETCH_BOOST=FALSE --log-level=VERBOSE -DCMAKE_INSTALL_PREFIX=/directory_to_place/salmon/1.5.2 -DFETCH_STADEN=TRUE -DNO_IPO=TRUE...

I confirm that this causes havoc when using environment modules here as well.

It would be awesome if we had an example of where this usually goes...! e.g would it go to under a story.canContinue (i'm looking at the Intercept) or in Enter?...

I have been using --file as it's the only way to index files behind authentication. How difficult would it be to allow the jbrowse tools to send a credential?

yes, my json is referrring to files behind http basic authentication (in this case an ldap) when i was playing around with puppeteer i noticed that there was a way...

> It's abandoned. The alternative is the [OneDrive Integration](https://apps.nextcloud.com/apps/integration_onedrive). It connects to OneDrive and allows to import files Sadly that is a one-way connection, you can import files from Onedrive...

> As a workaround (or solution), you may use `requires_groups` or `requires_roles` to specify exactly who can see and access those file sources. You could make them only visible then...

i love the requires_groups and also the `root: /data_storage/common/datasets/common_upload/${user.email]}/` (could we document it?) `readable:` so the setting with same thinking seems to already exist as `browsable` but i can't seem...