alina-bauer

Dear MhcNuggets Maintainers, Thank you for providing this great prediction tool. Would it be possible to add a version.py and/or a CLI version flag to easily access the version number...

It should be a subworkflow that replaces the function [make_predictions_from_peptides](https://github.com/nf-core/epitopeprediction/blob/b0f0d7a5b3cd352e548901e4cc19937c73add465/bin/epaa.py#L1111C5-L1111C35) in epaa.py. That subworkflow takes as input a tsv file containing a column sequence (and additional metadata). Depending on the...