Alexandros Sigaras

new study: ccrcc_wcm_2022

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# What? Added new clear cell renal carcinoma (ccRCC) study. The paper is accepted and the PMID and citation are available. # checks For all pull requests: - [x] Passes...

prad_mskcc data issue

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Cohort location on repo: **public/prad_mskcc cohort** Latest commit hash: **4003599d8e2f7f1f491b8cf6755b0d3c6a9b9b3b** cBioPortal version: **3.7.22** Import attempted on: **01/21/2022** Validation status: **Passed** Import status: **Failed** Error: **java.lang.NumberFormatException: For input string: "NA"** Attaching...

lusc_cptac_2021 data issue

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Cohort location on repo: **public/lusc_cptac_2021** Latest commit hash: **0dd135a54412b969be818ac5a412dc1cc9d00ea5** cBioPortal version: **3.7.22** Import attempted on: **01/20/2022** Validation status: **Failed** Import status: **Failed** Error: **java.lang.RuntimeException: org.mskcc.cbio.portal.dao.DaoException: DB Error: only 22470 of...

gbm_cptac_2021 data issue

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Cohort location on repo: **public/gbm_cptac_2021** Latest commit hash: **490bba9ec1b5f41c386932836d531a5ba07bc01a** cBioPortal version: **3.7.22** Import attempted on: **01/20/2022** Validation status: **Failed** Import status: **Failed** Error: **_csv.Error: line contains NUL** Validation fails when...

paad_cptac_2021 data issue

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Cohort location on repo: **public/paad_cptac_2021** Latest commit hash: **037f82536f0767e44ee51204372f2c3e709d3d43** cBioPortal version: **3.7.22** Import attempted on: **01/20/2022** Validation status: **Passed** Import status: **Failed** Error: **java.lang.RuntimeException: org.mskcc.cbio.portal.dao.DaoException: Data truncation: Data too long...

This change addresses all security vulnerabilities that are not covered in ubuntu:16.04 image but area already addressed in debian:stretch image.

Data issue for study: cll_broad_2022

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We are trying to import cll_broad_2022 into a private installation of cbioportal and getting this error ``` ERROR: data_clinical_sample.txt: lines [6, 7, 8, (1151 more)]: column 22: Value of numeric...