Alex Holehouse

icon indicating a website link http://holehouse.wustl.edu icon indicating an email [email protected]

icon company Washington University School of Medicine icon location Saint Louis, MO icon location Assistant Professor of Biophysics @ Washington University School of Medicine - we study how function is encoded into intrinsically disordered protein regions.

Results 2 issues of Alex Holehouse

MDTraj 1.9.7 on M1 chip fails with image_molecules()

4 comment

Evening folks, It *seems* `image_molecules()` for ARM-compiled (Apple Silicon, M1 chip) MDTraj fails and returns NaNs. Minimal example: ```Python import mdtraj as md # read in your favorite trajectory u...

Apparent incompatibility with (PyPI) docker 5.0.0 and requests 2.31.0 (solved)

4 comment

On installing/setting up the full alphafold version this week, I finally got things downloaded, but running predictions was met with `alphafold docker.errors.DockerException: Error while fetching server API version: request() got...