scSTEM
scSTEM copied to clipboard
alexQiSong
Single cell STEM (scSTEM) is a shiny app based R package for visualizing and clustering genes in pseudotime ordered single cell RNA-seq data. scSTEM is a GUI based tool and thus does not require any c...
Hi, can I use Seurat object (with UMAP/clustering already done) just to do the trajectory analysis ? thanks
Hello, I've tried scSTEM with both the sample data and my own data. After loading the data, I try to proceed to the UMAP step. However I get the following...
Overall, it is very easy to install scSTEM using the first option and run it, it is very accessible. I have a few minor comments: - it would be nice...
Metadata
Owner
Metadata
Single cell STEM (scSTEM) is a shiny app based R package for visualizing and clustering genes in pseudotime ordered single cell RNA-seq data. scSTEM is a GUI based tool and thus does not require any c...