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Review of scSTEM repo

Open marouenbg opened this issue 3 years ago • 3 comments

Overall, it is very easy to install scSTEM using the first option and run it, it is very accessible. I have a few minor comments:

  • it would be nice to abstract a few steps by the command line, for example: the download of lock file could be done through a command like curl -O file.lock
  • Also, you can specify the example path only once in the beginning as a variable for example path <- 'home/alex/sctem' and then refer to that variable for the remainder of the tutorial.
  • You can also include the installation of the trajectory inference software as a dependency
  • Finally, it would be nice to have an example button in the GUI that preloads some toy example data or even real world data.

Fantastic tool overall!

marouenbg avatar Oct 07 '21 18:10 marouenbg