alex-trist

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Same here. No SNP's written in output. Here is my log ### echo snippy 4.6.0 ### cd /home/microseq/Seq_HUMS/VRE3 ### /home/microseq/anaconda3/envs/snippy2/bin/snippy --cpus 22 --cleanup --outdir snippy/349333 --reference Ref_VRE_VanA_ST612.fasta --R1 trimm/349333_R1_trim.fastq.gz --R2...

Hi everyone. Same error here. Any sugestions??