Alessio Buccino

Results 477 comments of Alessio Buccino

Yes. The cached data is whitened and filtered, but it doesn't know! So in that case you have to manually set filter and whiten to False. Another option when running...

Hi Anthony, Your assumption is correct. The peaks should be positive! Can you check the distribution of `peaks["amplitude"]`?

What about getting rid of the `mountainsort5` write function and just write the preprocessed recording in the output folder? Simiilar to KS? That was my initial suggestion: https://github.com/SpikeInterface/spikeinterface/pull/2225#discussion_r1401894514 Then it...

> (I think it is complicated by the `by_property` for me since the cache files have the same name.) It shouldn't fail because each group gets its own `output_folder`. I'll...

Thanks for reporting this @shunnnli Note that we'll have a plexon2 reader very soon which might fix the issue: https://github.com/SpikeInterface/spikeinterface/pull/1736 If you have time, you can try to checkout that...

@zm711 I'm doing a pass over this! and fix outdated stuff. Let me check with @samuelgarcia an push here

@zm711 done on my end!

@shunnnli does this error only appear if you sort by property?

Ok, can you make sure you followed the instructions here? https://spikeinterface.readthedocs.io/en/latest/modules/sorters.html#running-sorters-in-docker-singularity-containers Basically you need to have Docker desktop installed, an account on dockerhub, and being logged in (for Windows)