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                                            Ksenia L

Missing key SEQ for <INS>

Nice hack! ` vcf.info["LEFT_SVINSSEQ"] + ('N' * 200) + vcf.info["RIGHT_SVINSSEQ"]` will throw an error though, as `vcf.info["LEFT_SVINSSEQ"] ` is returned as a tuple **("ACC...T",)**, so `vcf.info["LEFT_SVINSSEQ"][0]` is what will be...

feature request - indicate annotation file has a subset of chroms

Very relevant for MT dataset - there is massive amount of warnings for all other chromosomes. it would be nice to have something optional - like [filter] or [skip] for...

Enhance the FORMAT column of merge subcommand.

Hi @J35P312 , We also love your package! Any progress on this issue? I agree that it is very useful to be able to retail the FORMAT field values from...