Ajit Johnson Nirmal

I apologize for missing this issue. For some reason, I have not been receiving notifications for the issues raised in this channel. Does the issue still persist, and would you...

I apologize for missing this issue. For some reason, I have not been receiving notifications for the issues raised in this channel. Does the issue still persist, and would you...

Hi, @jamesMo84 thankyou for your questions. I think the reason I restricted pulling data from a single column (`tl.foldchange`) is to decrease the number of parameters the `user` needs to...

I apologize for missing this issue. For some reason, I have not been receiving notifications for the issues raised in this channel. Does the issue still persist, and would you...

Hi @bugie19 Yes it is absolutely possible to do so. If you are using `sm.pp.mcmicro_to_scimap` function to create the `adata` object, you can simply import all the images together like...

I am sorry, I am just seeing this issue. You would need to call all functions as part of a submodule. `combat` belongs to the pre-processing sub-module and so needs...

Hi @jnmark before I embark on trying to figure this out, have you tried `palette = {'0': '#1f77b4', '1': '#ff7f0e'...}` passing your cluster names as a string such as `'0'`...

@jnmark I think it is the default matplotlib order (Is it likely alphabetical ordering or numeric ordering. like 0,1,10,...,19, 2, 20, ...). If you want a specific ordering I would...

hi, @Isaacyz can you give me some context as to why it would be nice to have the counts be returned? I want to make sure that it is statistically...

Dear @Isaacyz Thank you for digging this bug out. I have fixed it. `pip install scimap --upgrade` for the revised version. Thank you.