aidanshoham12

Hello, Ive been having the same issue in the LD refinement module, here is the error message message im getting: `python ${path}/src/Monopogen.py somatic -a ${path}/apps -r ${path}/lab_samples/region_lst/region.lst -t 1 -i...

Hello I just wanted to update about the above issue, I think the issue was that I was using the `CCDG_14151_B01_GRM_WGS_2020-08-05_chr20.filtered.shapeit2-duohmm-phased.vcf.gz` that only contained 2 Mb of SNVs instead of...

hello, here are the three files produced after running the germline module with their respective sizes: 8195748066, chr1.gl.vcf.gz 852, chr1.gp.log 859, chr1.phased.log The chr1.gl.vcf.gz contains 871954 SNVs that were detected...