Ahmet Rifaioglu

How to get corrected counts

5

Dear @saketkc, I would like to first thank you for providing SCTransform in python. I was wondering what is the proper way of getting corrected counts to perform further analysis?...

Sanity check if liana uses the log normalised values

1

**Is your feature request related to a problem? Please describe.** Users sometimes run liana on raw or differently normalized/transformed data or forgets to set `use_raw=False` which results in `NaN` or...