Anthony Gitter

I'm reopening this issue because the MathJax doesn't work on https://gitter-lab.github.io/ml-bio-workshop/aio/index.html In b63a7bdfe15b837300c4ea5b7e8f2ef4c493506a I moved where MathJax is included, but this didn't help.

For the 2021-05-04 workshop I updated all the polls to match [this version](https://github.com/gitter-lab/ml-bio-workshop/blob/770df740ceed1af3403202bc9d584249f16a5a95/planning/workshopPolls.txt). That addresses the first unclear question and the single versus multiple choice issues.

Once we decide what tool to use, we can put the plan in the instructor notes. Do we want to use a physical aide like signs or post it notes?...

Great, I missed that there was a Makefile driving the build process. That should be perfect for us. We'll still have to decide on what data precisely to include and...

[PyScript](https://www.anaconda.com/blog/pyscript-python-in-the-browser) is a framework for Python applications in a web browser.

We also want to add a brief readme for this dataset describing the source of the original and processed data.

Hopefully we'll be able to publicly post our manuscript as a preprint soon, which will further explain the motivation and contribution. Here are some example slides I've used when using...

Thanks for adding the datasets in #55. We can decide later how we want to handle the donor ID for the workshop. Currently, our software would treat the donor ID...

I've had some experience with Jinja2 in this Markdown-based manuscript project: - Replacing templates with values https://github.com/greenelab/manubot/blob/27456594c407f3fed35804db4bcf3b5bba88a716/manubot/manubot.py#L343 - Example of a Markdown file with templates https://raw.githubusercontent.com/greenelab/manubot-rootstock/master/content/00.front-matter.md

@cmilica and I discussed using Jupyter notebooks in addition to or instead of the graphical interface, and we should continue to weigh the pros and cons. Some advantages of a...