Andre Gohr

I agree to @aragilar. Teaching Git to Master/PhD students from biology and aligning the course to the Carpentries Git Novice, ran into issues with too much content and too little...

Same issue here with R 4.1 and hdf5=1.12.0; I have permissions but get the same error when intending to use function SaveH5Seurat. Is there a solution?

Solution that works for is before starting R setting: export HDF5_USE_FILE_LOCKING=FALSE

Dear Maximilian - I found that this issue is unrelated to the version of CellXGene. It's rather related to the version of the Python anndata library. When installing CellXGene these...

The comment directly before this code block reads: > // Split the contrasts up so we can run differential analyses and > // downstream plots separately. > // Replace NA...

Hey, checking for and dealing with NA entries in contrasts.csv seems reasonable. But, replacing any pattern match of 'NA' with the empty string will destroy meaningful entries like 'RNA_CONCENTRATION' or...