agarcia-ruiz comments

Repositories
Issues
Comments

Results 3 comments of


                                            agarcia-ruiz

Cannot use lime with grayscale images

Hi, I had a similar issue and it was because my `model.predict(img)` returned an array within an array, so I just did `model.predict(img)[0]` instead. Don't know if this is your...

Computing values on ground truth does not give perfect scores

It seems to do with the smooth parameter, changing it to smooth=0.0 gives a dice of 1.0. Some discussion about that [here](https://github.com/ivadomed/utilities/issues/42). https://github.com/Jingnan-Jia/segmentation_metrics/blob/df9a231275decb7803ed8e16792ccd3ab9300d28/seg_metrics/seg_metrics.py#L81-L89

MattesMutualInformationv4 throws exception when fixed image has a single value.

Hi, I have encountered this same issue with MI metric when running antsSliceRegularizedRegistration (2D slices), but as far as I can tell, no slices have a single value? Some may...