Sergey Aganezov

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icon company @nanoporetech icon location Cambridge, MA, USA icon location Husband, Son, Ph.D., Senior Genomic Applications Scientist @nanoporetech. I'm fascinated about everything, that has something unknown in it! Views are my own.

Results 15 comments of Sergey Aganezov

fasta2camsa_points - ERROR

I've corrected the `nucmer-cli-arguments` value in the settings file and pushed to the master branch.

Error building from source from pypi

Hi, thank you for reaching out. I just tested the `pip` based installation, and it works as expected (i.e., with no errors), same goes for the wheel distribution. Github source...

Error building from source from pypi

Shall be fixed in the new `1.1.0b15` version.

CAMSA - Can't we run in parallel mode

Hello and thank you for your interest in CAMSA. We don't have parallelization in CAMSA at the moment. If you have performance issues I would suggest that you try to...

camsa2fasta error - scaffold extremity adjacent to more than one other scaffold

Hi Elif, and thank you for interest in `CAMSA`! The reason `CAMSA` complains here is because in the `--points` file the assembly points constitute an assembly that has a branching...