/usr/bin/sh: 1: pyscenic: not found [BUG]

[RolantusdataExp]

HI, I think this is more an issue of defining my environment path, than it is a pyScenic problem, however when I try to run:

!pyscenic grn {loom_path} {tf_names} -o outpath_adj --num_workers 20

I get this error: /usr/bin/sh: 1: pyscenic: not found

I have pyscenic installed and imported to my JupyterNotebook. I guess the error says that it can't find pyScenic in the path described, however I don't know how to fix this

Best, Peter

[ghuls]

How did you try to install it?

Does importing pyscenic work in python itself, or does that also not work?

import pyscenic

[RolantusdataExp]

"import pyscenic" works fine, or atleast it does not complain when doing it

[ghuls]

What is the output of ! whereis pyscenic