pySCENIC icon indicating copy to clipboard operation
pySCENIC copied to clipboard

how to merge loom file of per celltype and to visualize?

Open Jingle0814 opened this issue 8 months ago • 0 comments

For questions about using SCENIC, please use the Discussions: https://github.com/aertslab/SCENIC/discussions/

Create an issue only to report bugs.

Mote that most errors are due to the input from the user, and therefore should be treated as questions in the Discussions. Please, only report them as bugs if you are quite certain that they are not behaving as expected. Hi, Thanks a lot to your team for developing pyscenic. I have some questions about the result visualization. Due to the large number of cells in my data, I ran pyscenic split by celltype,and get loom file per celltype,how to merge the loom files and visiualize? thanks a lot!

Jingle0814 avatar Dec 03 '23 10:12 Jingle0814