[results] Is there a way to control the parallel computing in python script instead of CLI version?

[pekjoonwu]

Hey,

I am wondering if there is a way to specify the core for the python function when running the function. I checked the arboreto package but it seems like there is no such a variable. If we use CLI, we an specify --num_workers but there is no equivalent way in python? Please let me know if I miss something.

Thanks!

[jpcartailler]

Not the maintainer, but it's not clear what you are asking. Perhaps you can provide a more detailed description of what you are trying to do and provide code/commands.

[ghuls]

Most functions accept a num_workers argument:

https://github.com/aertslab/pySCENIC/search?q=num_workers

https://github.com/aertslab/pySCENIC/blob/25a8211f900f73c8b0aacc717f7dc6d8419f95f5/src/pyscenic/cli/arboreto_with_multiprocessing.py#L146-L152